setGraph: setGraph

In tmuetze/Bioconductor_RCy3_the_new_RCytoscape: Display and manipulate graphs in Cytoscape >= 3.3.0

Description

Assigns the supplied graph object to the appropriate slot in the specified CytoscapeWindow object.

Usage

setGraph(obj, graph)

Arguments

obj	a CytoscapeWindowClass object.
graph	a graph object.

Value

The modified CytoscapeWindow object.

Author(s)

Tanja Muetze, Georgi Kolishovski, Paul Shannon

Examples

  ## Not run: 
  # first, delete existing windows to save memory:
  deleteAllWindows(CytoscapeConnection())

  cw <- CytoscapeWindow ('setGraph.test')  # an empty graph is created by default
  graph <- makeSimpleGraph ()
  setGraph (cw, graph)
  displayGraph (cw)
  layoutNetwork (cw, 'force-directed')
  print (length (nodes (getGraph (cw))))

## End(Not run)

tmuetze/Bioconductor_RCy3_the_new_RCytoscape documentation built on May 31, 2019, 4:39 p.m.