deleteSelectedNodes: deleteSelectedNodes

In tmuetze/Bioconductor_RCy3_the_new_RCytoscape: Display and manipulate graphs in Cytoscape >= 3.3.0

Description

This function deletes all the selected nodes in Cytoscape. Edges originating or terminating in these nodes will also be deleted. The nodes and edges will still exist in the corresponding R graph until you explicitly delete them there as well.

Usage

deleteSelectedNodes(obj)

Arguments

obj	a CytoscapeWindowClass object.

Value

None.

Author(s)

Tanja Muetze, Georgi Kolishovski, Paul Shannon

See Also

selectNodes deleteSelectedEdges

Examples

  ## Not run: 
  # first, delete existing windows to save memory:
  deleteAllWindows(CytoscapeConnection())

  cw <- CytoscapeWindow ('deleteSelectedNodes.test', graph=makeSimpleGraph())
  displayGraph (cw)
  redraw (cw)
  layoutNetwork(cw, 'force-directed') 
  print (nodes (cw@graph))
    # [1] "A" "B" "C"
  selectNodes (cw, "B")
  deleteSelectedNodes (cw)

## End(Not run)

tmuetze/Bioconductor_RCy3_the_new_RCytoscape documentation built on May 31, 2019, 4:39 p.m.