setDefaultNodeShape: setDefaultNodeShape

In tmuetze/Bioconductor_RCy3_the_new_RCytoscape: Display and manipulate graphs in Cytoscape >= 3.3.0

Description

For all CytoscapeWindows, specify the default node shape.

Usage

setDefaultNodeShape(obj, new.shape, vizmap.style.name = "default")

Arguments

obj	a CytoscapeConnectionClass object.
new.shape	a String object, one of the permissible values (see getNodeShapes).
vizmap.style.name	a String object.

Value

None.

Author(s)

Tanja Muetze, Georgi Kolishovski, Paul Shannon

See Also

getNodeShapes setDefaultNodeShape setDefaultNodeColor setDefaultNodeSize setDefaultNodeColor setDefaultNodeBorderColor setDefaultNodeBorderWidth setDefaultNodeFontSize setDefaultNodeLabelColor setDefaultEdgeLineWidth setEdgeColorRule setNodeBorderColorRule

Examples

  ## Not run: 
  # first, delete existing windows to save memory:
  deleteAllWindows(CytoscapeConnection())

  cw <- CytoscapeWindow ('setDefaultNodeShape.test', graph=makeSimpleGraph())
  displayGraph (cw)
  layoutNetwork (cw, 'grid')
  legal.shapes <- getNodeShapes (cw)
  #stopifnot ('DIAMOND' 
  setDefaultNodeShape (cw, 'DIAMOND')
  # redraw (cw) --> not required anymore

## End(Not run)

tmuetze/Bioconductor_RCy3_the_new_RCytoscape documentation built on May 31, 2019, 4:39 p.m.