selectNodes: selectNodes

In tmuetze/Bioconductor_RCy3_the_new_RCytoscape: Display and manipulate graphs in Cytoscape >= 3.3.0

Description

Select the specified nodes.

Usage

selectNodes(obj, node.names, preserve.current.selection=TRUE)

Arguments

obj	a CytoscapeWindowClass object.
node.names	a list of strings, the names of nodes to select.
preserve.current.selection	a logical object.

Value

None.

Author(s)

Tanja Muetze, Georgi Kolishovski, Paul Shannon

See Also

clearSelection getSelectedNodeCount getSelectedNodes hideSelectedNodes

Examples

  ## Not run: 
  # first, delete existing windows to save memory:
  deleteAllWindows(CytoscapeConnection())

  cw <- CytoscapeWindow ('selectNodes.test', graph=makeSimpleGraph())
  displayGraph (cw)
  layoutNetwork(cw, 'force-directed')
  clearSelection (cw)
  selectNodes (cw, c ('A', 'B'))
  getSelectedNodes (cw)
    # [1] "A" "B"

## End(Not run)

tmuetze/Bioconductor_RCy3_the_new_RCytoscape documentation built on May 31, 2019, 4:39 p.m.