data: 100 mESCs example data
In tallulandrews/scTarNet: Single-cell Targetted Network Inference
Description
Usage
Format
Value
Source
Description
A subset of the Kolodziejczk et al. (2015) mESC data. 50 cells from the a2i and 50 cells from the lif growth conditions were randomly sampled. Genes were filtered to remove lowly expressed and genes (mean expression < 5) or without correlations of magnitude >0.2 with other genes.
Usage
1
Format
A dataframe of 3134 rows (genes) and 100 columns (cells) of CPM normalized read counts
Value
A dataframe of 3134 rows (genes) and 100 columns (cells) of CPM normalized read counts
Source
https://www.ebi.ac.uk/teichmann-srv/espresso/
tallulandrews/scTarNet documentation built on May 31, 2019, 2:27 p.m.
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Description Usage Format Value Source
Description
A subset of the Kolodziejczk et al. (2015) mESC data. 50 cells from the a2i and 50 cells from the lif growth conditions were randomly sampled. Genes were filtered to remove lowly expressed and genes (mean expression < 5) or without correlations of magnitude >0.2 with other genes.
Usage
1 |
Format
A dataframe of 3134 rows (genes) and 100 columns (cells) of CPM normalized read counts
Value
A dataframe of 3134 rows (genes) and 100 columns (cells) of CPM normalized read counts
Source
https://www.ebi.ac.uk/teichmann-srv/espresso/
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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