tallulandrews/scTarNet: Single-cell Targetted Network Inference
This package uses partial correlations to identify interactions between a set of user-provided transcription factors. Uses distance- and spearman- correlations to deal with non-gaussian single-cell RNASeq data.
Getting started
Browse package contents
Package details |
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| Author | Tallulah Andrews <tallulandrews@gmail.com> |
| Bioconductor views | GeneExpression GraphAndNetwork RNASeq Sequencing Software Transcriptomics |
| Maintainer | Tallulah Andrews <tallulandrews@gmail.com> |
| License | GPL (>=2) |
| Version | 0.01.00 |
| URL | https://github.com/tallulandrews/scTarNet |
| Package repository | View on GitHub |
| Installation |
Install the latest version of this package by entering the following in R:
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