CnR_H3K27ac_picard: Example Picard duplication metrics file 2
In serachoi1230/EpiCompare: Comparison, Benchmarking & QC of Epigenomic Datasets
CnR_H3K27ac_picard R Documentation
Example Picard duplication metrics file 2
Description
Duplication metrics output on CUT&Run H3K27ac file
(sample accession: SRR8581604).
Raw sequences were aligned to hg19 genome and after,
Picard was performed by Leyla Abbasova.
The duplication summary output generated by Picard
was processed to reduce the size of data.
Usage
data("CnR_H3K27ac_picard")
Format
An object of class data.frame with 1 rows and 10 columns.
Source
The code to prepare the .Rda file is:
picard <- read.table("path/to/picard/duplication/output",
header = TRUE, fill = TRUE)
CnR_H3K27ac_picard <- picard[1,]
usethis::use_data(CnR_H3K27ac_picard, overwrite = TRUE)
serachoi1230/EpiCompare documentation built on Jan. 30, 2024, 11:37 a.m.
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| CnR_H3K27ac_picard | R Documentation |
Example Picard duplication metrics file 2
Description
Duplication metrics output on CUT&Run H3K27ac file (sample accession: SRR8581604). Raw sequences were aligned to hg19 genome and after, Picard was performed by Leyla Abbasova. The duplication summary output generated by Picard was processed to reduce the size of data.
Usage
data("CnR_H3K27ac_picard")
Format
An object of class data.frame with 1 rows and 10 columns.
Source
The code to prepare the .Rda file is:
picard <- read.table("path/to/picard/duplication/output",
header = TRUE, fill = TRUE)
CnR_H3K27ac_picard <- picard[1,]
usethis::use_data(CnR_H3K27ac_picard, overwrite = TRUE)
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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