parseGSEMatrix: Parse a GSE mstrix file
In seandavi/GEOquery: Get data from NCBI Gene Expression Omnibus (GEO)
parseGSEMatrix R Documentation
Parse a GSE mstrix file
Description
Not meant for user calling, but parses
a single GSEMatrix file.
Usage
parseGSEMatrix(
fname,
AnnotGPL = FALSE,
destdir = tempdir(),
getGPL = TRUE,
parseCharacteristics = TRUE
)
Arguments
fname
filename
AnnotGPL
set to TRUE to get the annotation GPL version
destdir
the destdination directory for download
getGPL
whether or not to get the GPL associated
parseCharacteristics
Whether or not to do full 'characteristic' parsing
seandavi/GEOquery documentation built on Oct. 29, 2024, 1:24 p.m.
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| parseGSEMatrix | R Documentation |
Parse a GSE mstrix file
Description
Not meant for user calling, but parses a single GSEMatrix file.
Usage
parseGSEMatrix(
fname,
AnnotGPL = FALSE,
destdir = tempdir(),
getGPL = TRUE,
parseCharacteristics = TRUE
)
Arguments
fname |
filename |
AnnotGPL |
set to TRUE to get the annotation GPL version |
destdir |
the destdination directory for download |
getGPL |
whether or not to get the GPL associated |
parseCharacteristics |
Whether or not to do full 'characteristic' parsing |
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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