SetMatAdj: Record the adjacency matrices in a slot of the dataset of...
In samWieczorek/DAPAR: Tools for the Differential Analysis of Proteins Abundance with R
SetMatAdj R Documentation
Record the adjacency matrices in a slot of the
dataset of class MSnSet
Description
Record the adjacency matrices in a slot of the
dataset of class MSnSet
Usage
SetMatAdj(obj, X)
Arguments
obj
An object (peptides) of class MSnSet.
X
A list of two adjacency matrices
Value
NA
Author(s)
Samuel Wieczorek
Examples
utils::data(Exp1_R25_pept, package='DAPARdata')
Xshared <- BuildAdjacencyMatrix(Exp1_R25_pept[1:1000], "Protein_group_IDs", FALSE)
Xunique <- BuildAdjacencyMatrix(Exp1_R25_pept[1:1000], "Protein_group_IDs", TRUE)
ll.X <- list(matWithSharedPeptides = Xshared, matWithUniquePeptides = Xunique)
Exp1_R25_pept <- SetMatAdj(Exp1_R25_pept, ll.X)
samWieczorek/DAPAR documentation built on May 6, 2022, 5:30 p.m.
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| SetMatAdj | R Documentation |
Record the adjacency matrices in a slot of the
dataset of class MSnSet
Description
Record the adjacency matrices in a slot of the
dataset of class MSnSet
Usage
SetMatAdj(obj, X)
Arguments
obj |
An object (peptides) of class |
X |
A list of two adjacency matrices |
Value
NA
Author(s)
Samuel Wieczorek
Examples
utils::data(Exp1_R25_pept, package='DAPARdata') Xshared <- BuildAdjacencyMatrix(Exp1_R25_pept[1:1000], "Protein_group_IDs", FALSE) Xunique <- BuildAdjacencyMatrix(Exp1_R25_pept[1:1000], "Protein_group_IDs", TRUE) ll.X <- list(matWithSharedPeptides = Xshared, matWithUniquePeptides = Xunique) Exp1_R25_pept <- SetMatAdj(Exp1_R25_pept, ll.X)
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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