BuildMetaCell: xxxx

In samWieczorek/DAPAR: Tools for the Differential Analysis of Proteins Abundance with R

xxxx

Description

xxxxxx

Usage

BuildMetaCell(from, level, qdata = NULL, conds = NULL, df = NULL)

Arguments

from	xxx
level	xxx
qdata	An object of class MSnSet
conds	xxx
df	A list of integer xxxxxxx

Value

xxxxx

Author(s)

Samuel Wieczorek

Examples

file <- system.file("extdata", "Exp1_R25_pept.txt", package="DAPARdata")
data <- read.table(file, header=TRUE, sep="\t",stringsAsFactors = FALSE)
metadataFile <- system.file("extdata", "samples_Exp1_R25.txt", 
package="DAPARdata")
metadata <- read.table(metadataFile, header=TRUE, sep="\t", as.is=TRUE, 
stringsAsFactors = FALSE)
conds <- metadata$Condition
qdata <- data[,56:61]
df <- data[ , 43:48]
df <- BuildMetaCell(from = 'maxquant', level='peptide', qdata = qdata, 
conds = conds, df = df)
df <- BuildMetaCell(from = 'proline', level='peptide', qdata = qdata, 
conds = conds, df = df)

samWieczorek/DAPAR documentation built on May 6, 2022, 5:30 p.m.