GetDetailedNbPeptides: Computes the detailed number of peptides for each protein
In samWieczorek/DAPAR: Tools for the Differential Analysis of Proteins Abundance with R
GetDetailedNbPeptides R Documentation
Computes the detailed number of peptides for each protein
Description
Method to compute the detailed number of quantified peptides for each protein
Usage
GetDetailedNbPeptides(X)
Arguments
X
An adjacency matrix
Value
A data.frame
Author(s)
Samuel Wieczorek
Examples
library(MSnbase)
utils::data(Exp1_R25_pept, package='DAPARdata')
obj.pep <- Exp1_R25_pept[1:10]
protID <- "Protein_group_IDs"
X <- BuildAdjacencyMatrix(obj.pep, protID, FALSE)
n <- GetDetailedNbPeptides(X)
samWieczorek/DAPAR documentation built on May 6, 2022, 5:30 p.m.
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| GetDetailedNbPeptides | R Documentation |
Computes the detailed number of peptides for each protein
Description
Method to compute the detailed number of quantified peptides for each protein
Usage
GetDetailedNbPeptides(X)
Arguments
X |
An adjacency matrix |
Value
A data.frame
Author(s)
Samuel Wieczorek
Examples
library(MSnbase) utils::data(Exp1_R25_pept, package='DAPARdata') obj.pep <- Exp1_R25_pept[1:10] protID <- "Protein_group_IDs" X <- BuildAdjacencyMatrix(obj.pep, protID, FALSE) n <- GetDetailedNbPeptides(X)
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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