kegg_pathway_list: List of KEGG pathways

In saezlab/OmnipathR: OmniPath web service client and more

List of KEGG pathways

Description

Retrieves a list of available KEGG pathways.

Usage

kegg_pathway_list()

Value

Data frame of pathway names and identifiers.

See Also

• kegg_process

• kegg_pathway_download

• kegg_pathways_download

• kegg_open

• kegg_picture

• kegg_info

Examples

kegg_pws <- kegg_pathway_list()
kegg_pws
# # A tibble: 521 x 2
#    id       name
#    <chr>    <chr>
#  1 map01100 Metabolic pathways
#  2 map01110 Biosynthesis of secondary metabolites
#  3 map01120 Microbial metabolism in diverse environments
#  4 map01200 Carbon metabolism
#  5 map01210 2-Oxocarboxylic acid metabolism
#  6 map01212 Fatty acid metabolism
#  7 map01230 Biosynthesis of amino acids
# # . with 514 more rows

saezlab/OmnipathR documentation built on Oct. 16, 2024, 11:49 a.m.