rowSums-methods: rowSums for snap objects

In r3fang/SnapATAC: Single Nucleus Analysis Package for ATAC-Seq

rowSums for snap objects

Description

This function takes a snap object and returns the row sums of its count matrix.

Usage

## S4 method for signature 'snap'
rowSums(x, mat = c("bmat", "pmat", "gmat"), na.rm = TRUE)

Arguments

x	A snap object
mat	A charater object indicates what matrix slot to use
na.rm	A logical variable indicates wether to remove NA in the matrix

Examples

data(demo.sp);
a = rowSums(demo.sp, mat="bmat");
b = rowSums(demo.sp, mat="pmat");
d = rowSums(demo.sp, mat="gmat");

r3fang/SnapATAC documentation built on March 29, 2022, 4:33 p.m.