check_annotation: check for correct column names in annotation file and replace...

In omnideconv/SimBu: Simulate Bulk RNA-seq Datasets from Single-Cell Datasets

check for correct column names in annotation file and replace them if necessary

Description

check for correct column names in annotation file and replace them if necessary

Usage

check_annotation(annotation, cell_column = "cell_type", id_column = 1)

Arguments

annotation	dataframe; annotation dataframe
cell_column	name of cell-type column; default is "cell_type"
id_column	name of cell ID column; default is 1, which uses the rownames

Value

annotation dataframe with correct column names

omnideconv/SimBu documentation built on May 5, 2024, 12:33 p.m.