loadDrugDescriptors: Load table with drug descriptors

In nuno-agostinho/cTRAP: Identification of candidate causal perturbations from differential gene expression data

Load table with drug descriptors

Description

Load table with drug descriptors

Usage

loadDrugDescriptors(
  source = c("NCI60", "CMap"),
  type = c("2D", "3D"),
  file = NULL,
  path = NULL
)

Arguments

source	Character: source of compounds used to calculate molecular descriptors (NCI60 or CMap)
type	Character: load 2D or 3D molecular descriptors
file	Character: filepath to drug descriptors (automatically downloaded if file does not exist)
path	Character: folder where to find files (optional; file may contain the full filepath if preferred)

Value

Data table with drug descriptors

See Also

Other functions for drug set enrichment analysis: analyseDrugSetEnrichment(), plotDrugSetEnrichment(), prepareDrugSets()

Examples

loadDrugDescriptors()

nuno-agostinho/cTRAP documentation built on March 28, 2024, 3:59 p.m.