translate_genome: Translate genome

In neurogenomics/PeakyFinders: Mining, Calling, and Importing Epigenomic Peaks in R

Translate genome

Description

Translate the name of a genome build from one format to another.

Usage

translate_genome(
  genome,
  style = c("UCSC", "Ensembl", "NCBI"),
  omit_subversion = TRUE
)

Arguments

genome	A character vector of genomes equivalent to UCSC version or Ensembl Assemblies
style	A single value equivalent to "UCSC" or "Ensembl" specifying the output genome
omit_subversion	Omit any subversion suffixes after the ".".

Value

Standardized genome build name as a character string.

Examples

genome <- translate_genome(genome="hg38", style="Ensembl")

neurogenomics/PeakyFinders documentation built on Oct. 14, 2024, 3:09 p.m.