import_bedgraph_chroms: Get chromosomes
In neurogenomics/PeakyFinders: Mining, Calling, and Importing Epigenomic Peaks in R
View source: R/import_bedgraph_chroms.R
import_bedgraph_chroms R Documentation
Get chromosomes
Description
Query a bedGraph file by a subset of chromosomes.
This allows you to query whole chromosomes at a time, without needing to
import the entire bedGraph file.
Usage
import_bedgraph_chroms(
URL,
chroms = NULL,
build = "hg38",
import_format = "bedGraph",
export_format = import_format,
save_path = NULL,
verbose = TRUE
)
Value
GRanges
Source
neurogenomics/PeakyFinders documentation built on Oct. 14, 2024, 3:09 p.m.
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View source: R/import_bedgraph_chroms.R
| import_bedgraph_chroms | R Documentation |
Get chromosomes
Description
Query a bedGraph file by a subset of chromosomes. This allows you to query whole chromosomes at a time, without needing to import the entire bedGraph file.
Usage
import_bedgraph_chroms(
URL,
chroms = NULL,
build = "hg38",
import_format = "bedGraph",
export_format = import_format,
save_path = NULL,
verbose = TRUE
)
Value
GRanges
Source
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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