hg19ToHg38: UCSC Chain file hg19 to hg38
In neurogenomics/MungeSumstats: Standardise summary statistics from GWAS
hg19ToHg38 R Documentation
UCSC Chain file hg19 to hg38
Description
UCSC Chain file hg19 to hg38, .chain.gz file, downloaded from
https://hgdownload.cse.ucsc.edu/goldenpath/hg19/liftOver/ on 09/10/21
Format
gunzipped chain file
Details
UCSC Chain file hg19 to hg38, .chain.gz file, downloaded on 09/10/21
To be used as a back up if the download from UCSC fails.
hg19ToHg38.over.chain.gz
NA
Source
The chain file was downloaded from
https://hgdownload.cse.ucsc.edu/goldenpath/hg19/liftOver/
utils::download.file('ftp://hgdownload.cse.ucsc.edu/goldenPath/hg19/liftOver/hg19ToHg38.over.chain.gz',tempdir())
neurogenomics/MungeSumstats documentation built on Aug. 10, 2024, 5:59 a.m.
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| hg19ToHg38 | R Documentation |
UCSC Chain file hg19 to hg38
Description
UCSC Chain file hg19 to hg38, .chain.gz file, downloaded from https://hgdownload.cse.ucsc.edu/goldenpath/hg19/liftOver/ on 09/10/21
Format
gunzipped chain file
Details
UCSC Chain file hg19 to hg38, .chain.gz file, downloaded on 09/10/21 To be used as a back up if the download from UCSC fails.
hg19ToHg38.over.chain.gz
NA
Source
The chain file was downloaded from
https://hgdownload.cse.ucsc.edu/goldenpath/hg19/liftOver/
utils::download.file('ftp://hgdownload.cse.ucsc.edu/goldenPath/hg19/liftOver/hg19ToHg38.over.chain.gz',tempdir())
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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