column_dictionary: Map column names to positions.
In neurogenomics/MungeSumstats: Standardise summary statistics from GWAS
View source: R/column_dictionary.R
column_dictionary R Documentation
Map column names to positions.
Description
Useful in situations where you need to specify columns by
index instead of name (e.g. awk queries).
Usage
column_dictionary(file_path)
Arguments
file_path
Path to full summary stats file
(or any really file you want to make a column dictionary for).
Value
Named list of column positions.
Source
Borrowed function from
echotabix.
eduAttainOkbayPth <- system.file("extdata", "eduAttainOkbay.txt",
package = "MungeSumstats"
)
tmp <- tempfile(fileext = ".tsv")
file.copy(eduAttainOkbayPth, tmp)
cdict <- MungeSumstats:::column_dictionary(file_path = tmp)
neurogenomics/MungeSumstats documentation built on Aug. 10, 2024, 5:59 a.m.
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
View source: R/column_dictionary.R
| column_dictionary | R Documentation |
Map column names to positions.
Description
Useful in situations where you need to specify columns by index instead of name (e.g. awk queries).
Usage
column_dictionary(file_path)
Arguments
file_path |
Path to full summary stats file (or any really file you want to make a column dictionary for). |
Value
Named list of column positions.
Source
Borrowed function from echotabix.
eduAttainOkbayPth <- system.file("extdata", "eduAttainOkbay.txt",
package = "MungeSumstats"
)
tmp <- tempfile(fileext = ".tsv")
file.copy(eduAttainOkbayPth, tmp)
cdict <- MungeSumstats:::column_dictionary(file_path = tmp)
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
Embedding an R snippet on your website
Add the following code to your website.
For more information on customizing the embed code, read Embedding Snippets.