run_prop_tests: Run proportional enrichment tests
In neurogenomics/MultiEWCE: Multi-Scale Target Explorer
View source: R/run_prop_tests.R
run_prop_tests R Documentation
Run proportional enrichment tests
Description
Run a series of proportional enrichment tests on the results of a
phenotype to cell type association test.
Usage
run_prop_tests(
results,
branch_col = "ancestor_name",
celltype_col = "CellType",
func = list(rstatix::fisher_test, rstatix::prop_test)[[1]],
alternative = "greater",
cores = NULL,
...
)
Examples
results <- load_example_results()
results <- HPOExplorer::add_ancestor(results)
neurogenomics/MultiEWCE documentation built on April 17, 2025, 9:27 p.m.
R Package Documentation
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Note that we can't provide technical support on individual packages. You should contact the package authors for that.
View source: R/run_prop_tests.R
| run_prop_tests | R Documentation |
Run proportional enrichment tests
Description
Run a series of proportional enrichment tests on the results of a phenotype to cell type association test.
Usage
run_prop_tests(
results,
branch_col = "ancestor_name",
celltype_col = "CellType",
func = list(rstatix::fisher_test, rstatix::prop_test)[[1]],
alternative = "greater",
cores = NULL,
...
)
Examples
results <- load_example_results()
results <- HPOExplorer::add_ancestor(results)
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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