hclustWrapper: Wrapper for hierarchical clustering

In montilab/K2Taxonomer: Creating annotated submodules of high-throughput data through recursive partitioning

Wrapper for hierarchical clustering

Description

This fuction is a wrapper for the hclust, dist, and cutree functions. It outputs a string of a concatenated vector of 1's and 2's indexed by column. This function is not meant to be run individually, but as a 'clustFunc' argument for running K2tax().

Usage

hclustWrapper(labels, features, K2res)

Arguments

labels	Vector of cohort values
features	List of features (genes) to include
K2res	A K2 class object.

Value

A character string of concatenated 1's and 2's pertaining to the cohort assignments.

References

\insertRef

reed_2020K2Taxonomer

montilab/K2Taxonomer documentation built on April 5, 2025, 3:58 a.m.