variability_individual: variability_individual

In microbiome/microbiomeold: Tools for microbiome analysis

Description

Average CoV within individuals for each feature in the data matrix

Usage

variability_individual(dat, meta, method = "timevar")

Arguments

dat	Data matrix (samples x features)
meta	Metadata (samples x variables) with the following fields: subject, time
method	Method to calculate the variability within individuals: sd (ignores time) or timevar (normalizes by time)

Value

Vector. Average variability within individuals for each feature.

Examples

#library(microbiome)
  #data(peerj32)
  #cv <- variability_individual(peerj32$microbes, peerj32$meta)
  #print(head(cv))

microbiome/microbiomeold documentation built on May 22, 2019, 9:57 p.m.