Global functions | |
---|---|
.COBRAData | Man page |
.COBRAPerformance | Man page |
.COBRAPlot | Man page |
COBRAData | Man page Source code |
COBRAData-class | Man page |
COBRAData_from_text | Man page Source code |
COBRAData_to_text | Man page Source code |
COBRAPerformance | Man page Source code |
COBRAPerformance-class | Man page |
COBRAPlot | Man page Source code |
COBRAPlot,COBRAPerformance-method | Man page |
COBRAPlot-class | Man page |
COBRAapp | Man page Source code |
Extract | Man page |
[ | Man page |
[,COBRAData-method | Man page |
[,COBRAPerformance-method | Man page |
[,COBRAPlot-method | Man page |
\S4method{[}{COBRAData,ANY,ANY,ANY} | Man page |
\S4method{[}{COBRAData,ANY,ANY} | Man page |
\S4method{[}{COBRAPerformance,ANY,ANY,ANY} | Man page |
\S4method{[}{COBRAPerformance,ANY,ANY} | Man page |
\S4method{[}{COBRAPlot,ANY,ANY,ANY} | Man page |
\S4method{[}{COBRAPlot,ANY,ANY} | Man page |
basemethods | Man page |
basemethods,COBRAPerformance-method | Man page |
basemethods,COBRAPlot-method | Man page |
calculate_adjp | Man page Source code |
calculate_performance | Man page Source code |
check_agreement | Source code |
cobradata_example | Man page |
cobradata_example_sval | Man page |
coerce | Man page |
coerce, | Man page |
coerce,COBRAPerformance,COBRAPlot-method | Man page |
coerce,COBRAPlot,COBRAPerformance-method | Man page |
corr | Man page |
corr,COBRAPerformance-method | Man page |
corr,COBRAPlot-method | Man page |
corr<- | Man page |
corr<-,COBRAPerformance,data.frame-method | Man page |
corr<-,COBRAPlot,data.frame-method | Man page |
define_colors | Source code |
deviation | Man page |
deviation,COBRAPerformance-method | Man page |
deviation,COBRAPlot-method | Man page |
deviation<- | Man page |
deviation<-,COBRAPerformance,data.frame-method | Man page |
deviation<-,COBRAPlot,data.frame-method | Man page |
extend_resulttable | Source code |
facetted | Man page |
facetted,COBRAPlot-method | Man page |
facetted<- | Man page |
facetted<-,COBRAPlot,logical-method | Man page |
fdrnbr | Man page |
fdrnbr,COBRAPerformance-method | Man page |
fdrnbr,COBRAPlot-method | Man page |
fdrnbr<- | Man page |
fdrnbr<-,COBRAPerformance,data.frame-method | Man page |
fdrnbr<-,COBRAPlot,data.frame-method | Man page |
fdrnbrcurve | Man page |
fdrnbrcurve,COBRAPerformance-method | Man page |
fdrnbrcurve,COBRAPlot-method | Man page |
fdrnbrcurve<- | Man page |
fdrnbrcurve<-,COBRAPerformance,data.frame-method | Man page |
fdrnbrcurve<-,COBRAPlot,data.frame-method | Man page |
fdrtpr | Man page |
fdrtpr,COBRAPerformance-method | Man page |
fdrtpr,COBRAPlot-method | Man page |
fdrtpr<- | Man page |
fdrtpr<-,COBRAPerformance,data.frame-method | Man page |
fdrtpr<-,COBRAPlot,data.frame-method | Man page |
fdrtprcurve | Man page |
fdrtprcurve,COBRAPerformance-method | Man page |
fdrtprcurve,COBRAPlot-method | Man page |
fdrtprcurve<- | Man page |
fdrtprcurve<-,COBRAPerformance,data.frame-method | Man page |
fdrtprcurve<-,COBRAPlot,data.frame-method | Man page |
fix_duplicates | Source code |
fix_res | Source code |
fixcolname | Source code |
fpc | Man page |
fpc,COBRAPerformance-method | Man page |
fpc,COBRAPlot-method | Man page |
fpc<- | Man page |
fpc<-,COBRAPerformance,data.frame-method | Man page |
fpc<-,COBRAPlot,data.frame-method | Man page |
fpr | Man page |
fpr,COBRAPerformance-method | Man page |
fpr,COBRAPlot-method | Man page |
fpr<- | Man page |
fpr<-,COBRAPerformance,data.frame-method | Man page |
fpr<-,COBRAPlot,data.frame-method | Man page |
fsrnbr | Man page |
fsrnbr,COBRAPerformance-method | Man page |
fsrnbr,COBRAPlot-method | Man page |
fsrnbr<- | Man page |
fsrnbr<-,COBRAPerformance,data.frame-method | Man page |
fsrnbr<-,COBRAPlot,data.frame-method | Man page |
fsrnbrcurve | Man page |
fsrnbrcurve,COBRAPerformance-method | Man page |
fsrnbrcurve,COBRAPlot-method | Man page |
fsrnbrcurve<- | Man page |
fsrnbrcurve<-,COBRAPerformance,data.frame-method | Man page |
fsrnbrcurve<-,COBRAPlot,data.frame-method | Man page |
gen_thr_vec | Source code |
get_coltype | Source code |
get_curve | Source code |
get_curve_cont | Source code |
get_keepfeatures | Source code |
get_keeplevels | Source code |
is_plottable | Source code |
isinvalidpalette | Source code |
maxsplit | Man page |
maxsplit,COBRAPerformance-method | Man page |
maxsplit,COBRAPlot-method | Man page |
maxsplit<- | Man page |
maxsplit<-,COBRAPerformance,numeric-method | Man page |
maxsplit<-,COBRAPlot,numeric-method | Man page |
onlyshared | Man page |
onlyshared,COBRAPerformance-method | Man page |
onlyshared,COBRAPlot-method | Man page |
onlyshared<- | Man page |
onlyshared<-,COBRAPerformance,logical-method | Man page |
onlyshared<-,COBRAPlot,logical-method | Man page |
overlap | Man page |
overlap,COBRAPerformance-method | Man page |
overlap,COBRAPlot-method | Man page |
overlap<- | Man page |
overlap<-,COBRAPerformance,list_df-method | Man page |
overlap<-,COBRAPlot,list_df-method | Man page |
padj | Man page |
padj,COBRAData-method | Man page |
padj<- | Man page |
padj<-,COBRAData,data.frame-method | Man page |
plot_corr | Man page Source code |
plot_deviation | Man page Source code |
plot_fdrcurve | Source code |
plot_fdrnbrcurve | Man page Source code |
plot_fdrtprcurve | Man page Source code |
plot_fpc | Man page Source code |
plot_fpr | Man page Source code |
plot_fpr_tpr | Source code |
plot_fsrnbrcurve | Man page Source code |
plot_overlap | Man page Source code |
plot_roc | Man page Source code |
plot_roc_fpc | Source code |
plot_scatter | Man page Source code |
plot_theme | Source code |
plot_tpr | Man page Source code |
plot_upset | Man page Source code |
plotcolors | Man page |
plotcolors,COBRAPlot-method | Man page |
plotcolors<- | Man page |
plotcolors<-,COBRAPlot,character-method | Man page |
prepare_data_for_plot | Man page Source code |
pval | Man page |
pval,COBRAData-method | Man page |
pval<- | Man page |
pval<-,COBRAData,data.frame-method | Man page |
reorder_levels | Man page Source code |
res_check | Source code |
roc | Man page |
roc,COBRAPerformance-method | Man page |
roc,COBRAPlot-method | Man page |
roc<- | Man page |
roc<-,COBRAPerformance,data.frame-method | Man page |
roc<-,COBRAPlot,data.frame-method | Man page |
scatter | Man page |
scatter,COBRAPerformance-method | Man page |
scatter,COBRAPlot-method | Man page |
scatter<- | Man page |
scatter<-,COBRAPerformance,data.frame-method | Man page |
scatter<-,COBRAPlot,data.frame-method | Man page |
score | Man page |
score,COBRAData-method | Man page |
score<- | Man page |
score<-,COBRAData,data.frame-method | Man page |
select_measure | Source code |
splv | Man page |
splv,COBRAPerformance-method | Man page |
splv,COBRAPlot-method | Man page |
splv<- | Man page |
splv<-,COBRAPerformance,character-method | Man page |
splv<-,COBRAPlot,character-method | Man page |
stratiflevels | Man page |
stratiflevels,COBRAPerformance-method | Man page |
stratiflevels,COBRAPlot-method | Man page |
sval | Man page |
sval,COBRAData-method | Man page |
sval<- | Man page |
sval<-,COBRAData,data.frame-method | Man page |
symdiff | Source code |
tpr | Man page |
tpr,COBRAPerformance-method | Man page |
tpr,COBRAPlot-method | Man page |
tpr<- | Man page |
tpr<-,COBRAPerformance,data.frame-method | Man page |
tpr<-,COBRAPlot,data.frame-method | Man page |
truth | Man page |
truth,COBRAData-method | Man page |
truth<- | Man page |
truth<-,COBRAData,data.frame-method | Man page |
update_cobradata | Man page Source code |
update_cobraperformance | Man page Source code |
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