cxds_getTopPairs: Extract top-scoring gene pairs from an SingleCellExperiment...
In kostkalab/scds: In-Silico Annotation of Doublets for Single Cell RNA Sequencing Data
cxds_getTopPairs R Documentation
Extract top-scoring gene pairs from an SingleCellExperiment where cxds has been run
Description
Extract top-scoring gene pairs from an SingleCellExperiment where cxds has been run
Usage
cxds_getTopPairs(sce, n = 100)
Arguments
sce
single cell experiment to analyze; needs "counts" in assays slot.
n
integer. The number of gene pairs to extract. Default: 100
Value
matrix Matrix with two colulmns, each containing gene indexes for gene pairs (rows).
kostkalab/scds documentation built on Oct. 4, 2022, 6:56 p.m.
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| cxds_getTopPairs | R Documentation |
Extract top-scoring gene pairs from an SingleCellExperiment where cxds has been run
Description
Extract top-scoring gene pairs from an SingleCellExperiment where cxds has been run
Usage
cxds_getTopPairs(sce, n = 100)
Arguments
sce |
single cell experiment to analyze; needs "counts" in assays slot. |
n |
integer. The number of gene pairs to extract. Default: 100 |
Value
matrix Matrix with two colulmns, each containing gene indexes for gene pairs (rows).
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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