filter_pairs_example: spatzie score correlation filtered data set
In jhammelman/spatzie: Identification of enriched motif pairs from chromatin interaction data
filter_pairs_example R Documentation
spatzie score correlation filtered data set
Description
This object contains genomic interactions obtained by mouse YY1 ChIA-PET
scanned for mouse transcription factor motifs, filtered for motifs present
in at least 10
interactions with score correlation, and filtered for pairs with p < 0.5.
It serves as unit test data.
Usage
data(filter_pairs_example)
Format
An interactionData object
jhammelman/spatzie documentation built on Feb. 8, 2024, 8:50 a.m.
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| filter_pairs_example | R Documentation |
spatzie score correlation filtered data set
Description
This object contains genomic interactions obtained by mouse YY1 ChIA-PET scanned for mouse transcription factor motifs, filtered for motifs present in at least 10 interactions with score correlation, and filtered for pairs with p < 0.5. It serves as unit test data.
Usage
data(filter_pairs_example)
Format
An interactionData object
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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