plotFusionExpressionPlotData: Plot a fusionExpressionPlotData object

In jefferys/fusionExpressionPlot: Plot Expression Profiles for Fused Genes

Description

Plots the data object generated by getFusionExpressionPlotData and saves it as a pdf file. This is a lower-level function called by plotting functions like plotFusionExpressionOne or plotFusionExpressionPair

Usage

plotFusionExpressionPlotData(data, title, file = "temp.pdf", scale = 1000,
  ratio = 4, scaleOffset = 15)

Arguments

data	A data object generated by getFusionExpressionPlotData.
title	The title to put on the graph.
file	The filename (pdf) to save the plot as. By default this is temp.pdf
scale	The number of "bases" per inch in the plot, default = 1000
ratio	The height/width ratio of the plot.
scaleOffset	The distance in bases that the scale annotation is set below the gene exon graph.

Value

nothing

See Also

getFusionExpressionPlotData plotFusionExpressionOne plotFusionExpressionPair

jefferys/fusionExpressionPlot documentation built on May 19, 2019, 3:59 a.m.