getTemplates: Get the information (name and title) of the templates...
In intermine/InterMineR: R Interface with InterMine-Powered Databases
Description
Usage
Arguments
Value
Author(s)
Examples
Description
Get the information (name and title) of the templates pre-defined in InterMine. A template contain a query with fixed set of output columns, and at least one editable constraint, and possibly more.
Usage
1
getTemplates(im, format = "data.frame", timeout = 3)
Arguments
im
a Service object containing the base URL and API token, created by initInterMine.
format
a string with values being either "data.frame" or "list", representing the output format of the template information.
timeout
an integer, representing the number of seconds to wait for the webservice to respond.
Value
a data.frame or list object, representing the information (name and title) for the pre-define templates in the mine.
Author(s)
InterMine Team
Examples
1
2
3
4
# Get HumanMine template queries
im <- initInterMine(listMines()["HumanMine"])
templates <- getTemplates(im)
intermine/InterMineR documentation built on Jan. 10, 2022, 11:34 p.m.
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Description Usage Arguments Value Author(s) Examples
Description
Get the information (name and title) of the templates pre-defined in InterMine. A template contain a query with fixed set of output columns, and at least one editable constraint, and possibly more.
Usage
1 | getTemplates(im, format = "data.frame", timeout = 3)
|
Arguments
im |
a Service object containing the base URL and API token, created by |
format |
a string with values being either "data.frame" or "list", representing the output format of the template information. |
timeout |
an integer, representing the number of seconds to wait for the webservice to respond. |
Value
a data.frame or list object, representing the information (name and title) for the pre-define templates in the mine.
Author(s)
InterMine Team
Examples
1 2 3 4 | # Get HumanMine template queries
im <- initInterMine(listMines()["HumanMine"])
templates <- getTemplates(im)
|
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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