SNPdata: Artificial SNP array data

In igordot/copynumber: Segmentation of single- and multi-track copy number data by penalized least squares regression (with hg38 and mm10).

Artificial SNP array data

Description

Artificial SNP array data containing a logR track and a BAF track

Usage

data(logR)
data(BAF)

Format

Two corresponding data sets containing 10000 probes with logR and BAF measurements, respectively, for 2 samples. The two first columns in both data sets contain chromosome numbers and local probe positions (in base pairs), while the subsequent columns contain logR-values and BAF-values in the two data sets, respectively.

Examples

#Get data
data(logR)
data(BAF)

igordot/copynumber documentation built on Feb. 23, 2025, 1:47 a.m.