API for ibn-salem/chromloop
Computational Chromosome Conformation Capture by Correlation of ChIP-seq at CTCF motifs
| Global functions | |
|---|---|
| TFspecificModels | Man page |
| addCor | Man page |
| addCovCor | Man page |
| addCovToGR | Man page |
| addInteractionSupport | Man page |
| addMotifScore | Man page |
| addStrandCombination | Man page |
| cutoffBest10 | Man page |
| cutoffByTF | Man page |
| getCisPairs | Man page |
| getOutOfBound | Man page |
| modelBest10Avg | Man page |
| motif.hg19.CTCF | Man page |
| motif.hg19.CTCF.chr22 | Man page |
| motif.hg19.CTCF.chr22.cov | Man page |
| noZeroVar | Man page |
| parseLoopsRao | Man page |
| parseLoopsTang | Man page |
| predLogit | Man page |
| predLoops | Man page |
| prepareCisPairs | Man page |
| sevenC | Man page |
| sevenC-package | Man page |
| slideMean | Man page |
