enrichdot: Display enrichment result By using dotchart

In guokai8/EnrichR: Functional Enrichment analysis

Description

Display enrichment result By using dotchart

Usage

enrichdot(
  resultFis,
  top = 50,
  pvalue.cutoff = 0.05,
  order = FALSE,
  low = "lightpink",
  high = "red",
  alpha = 0.7,
  padj.cutoff = NULL,
  fontsize.x = 10,
  fontsize.y = 10,
  usePadj = TRUE,
  filename = NULL,
  width = 10,
  height = 8
)

Arguments

low	color used for small value
high	color used for large value
alpha	alpha-transparency scales
fontsize.x	fontsize for x axis
fontsize.y	fontsize for y axis
filename	output filename
width	width for output file
height	height for output file
resultFis:	Ennrichment analysis result data.frame
top:	Number of Terms you want to display
pvalue.cutoff:	the cut-off value for selecting Term
padj.cutoff:	the padj cut-off value for selecting Term

Author(s)

Kai Guo

guokai8/EnrichR documentation built on May 18, 2020, 5:29 a.m.