GE.plot: Display GO enrichment result

In guokai8/EnrichR: Functional Enrichment analysis

Description

Display GO enrichment result

Usage

GE.plot(
  resultFis,
  top = 50,
  pvalue.cutoff = 0.05,
  order = FALSE,
  horiz = FALSE,
  low = "lightpink",
  high = "red",
  font.x = "bold",
  font.y = "bold",
  fontsize.x = 10,
  fontsize.y = 10,
  fontsize.text = 3,
  angle = 75,
  padj.cutoff = NULL,
  usePadj = TRUE,
  filename = NULL,
  width = 10,
  height = 8
)

Arguments

order	order bar or not
horiz	horizontal plot or not (default: FALSE)
low	color used for small value
high	color used for large value
fontsize.x	fontsize for x axis
fontsize.y	fontsize for y axis
angle	angle for x ticks label
usePadj	use adjust pvalue or not
filename	output filename
width	width for output file
height	height for output file
resultFis:	GO ennrichment analysis result data.frame
top:	Number of Terms you want to display
filename:	output filename
pvalue.cutoff:	the cut-off value for selecting Term
padj.cutoff:	the padj cut-off value for selecting Term

Author(s)

Kai Guo

guokai8/EnrichR documentation built on May 18, 2020, 5:29 a.m.