topEnrichment: Number of top enrichment results of the pathway or GO terms...

In guldenolgun/NoRCE: NoRCE: Noncoding RNA Sets Cis Annotation and Enrichment

Number of top enrichment results of the pathway or GO terms for the given object and the order type - p-value or adjusted p-value.

Description

Number of top enrichment results of the pathway or GO terms for the given object and the order type - p-value or adjusted p-value.

Usage

topEnrichment(mrnaObject, type, n)

Arguments

mrnaObject	Object of the enrichment result
type	Draw the dot plot according to the p-value or adjusted p-value ("pvalue", "pAdjust")
n	Number of GO terms or pathways, that ordered by type and has least number of top p-value

Value

Give top n enrichment results

Examples

## Not run: 
ncGO<-geneGOEnricher(gene = brain_disorder_ncRNA, org_assembly='hg19',
   near=TRUE, genetype = 'Ensembl_gene')
   
result = topEnrichment(mrnaObject = ncGO, type = "pvalue", n = 10)

## End(Not run)

guldenolgun/NoRCE documentation built on Oct. 21, 2022, 11:48 a.m.