Files in guldenolgun/NoRCE
NoRCE: Noncoding RNA Sets Cis Annotation and Enrichment
.Rbuildignore
.gitignore
DESCRIPTION
LICENSE
NAMESPACE
NEWS
R/annotate.R
R/biotypeOperations.R
R/enrichment.R
R/expData.R
R/expressionBased.R
R/geneEnrichment.R
R/getNearest.R
R/mirnaEnrichment.R
R/pathway.R
R/plot.R
R/reverse.R
R/zzz.R
README.md
data/brain_disorder_ncRNA.rda
data/brain_mirna.rda
data/breastmRNA.rda
data/mirna.rda
data/mrna.rda
data/ncRegion.rda
data/tad_dmel.rda
data/tad_hg19.rda
data/tad_hg38.rda
data/tad_mm10.rda
inst/CITATION
inst/extdata/DER-18_TAD_adultbrain.txt
inst/extdata/ncRegion.txt
inst/extdata/temp.gtf
man/KeggEnrichment.Rd
man/NoRCE-class.Rd
man/WikiEnrichment.Rd
man/annGO.Rd
man/assembly.Rd
man/brain_disorder_ncRNA.Rd
man/brain_mirna.Rd
man/breastmRNA.Rd
man/calculateCorr.Rd
man/convertGMT.Rd
man/convertGeneID.Rd
man/corrbased.Rd
man/corrbasedMrna.Rd
man/createNetwork.Rd
man/drawDotPlot.Rd
man/extractBiotype.Rd
man/filterBiotype.Rd
man/geneGOEnricher.Rd
man/genePathwayEnricher.Rd
man/geneRegionGOEnricher.Rd
man/geneRegionPathwayEnricher.Rd
man/getGoDag.Rd
man/getKeggDiagram.Rd
man/getNearToExon.Rd
man/getNearToIntron.Rd
man/getReactomeDiagram.Rd
man/getTADOverlap.Rd
man/getUCSC.Rd
man/getmiRNACount.Rd
man/goEnrichment.Rd
man/listTAD.Rd
man/mirna.Rd
man/mirnaGOEnricher.Rd
man/mirnaPathwayEnricher.Rd
man/mirnaRegionGOEnricher.Rd
man/mirnaRegionPathwayEnricher.Rd
man/mrna.Rd
man/ncRegion.Rd
man/packageCheck.Rd
man/pathwayEnrichment.Rd
man/predictmiTargets.Rd
man/reactomeEnrichment.Rd
man/setParameters.Rd
man/tad_dmel.Rd
man/tad_hg19.Rd
man/tad_hg38.Rd
man/tad_mm10.Rd
man/topEnrichment.Rd
man/writeEnrichment.Rd
tests/testthat.R
tests/testthat/test-norce.R
vignettes/NoRCE.Rmd
vignettes/NoRce_workflow.png
vignettes/a.png
vignettes/dot.png
vignettes/network.png
