CNVRanges: Genomic locations and indices of the simulated CNVs.

In gpovysil/cn.mops: cn.mops - Mixture of Poissons for CNV detection in NGS data

Genomic locations and indices of the simulated CNVs.

Description

This data set gives the starts, ends, and the integer copy number of the simulated CNVs in the data set XRanges object.

Usage

CNVRanges

Format

A GRanges object with 20 rows and 40 value columns across 1 space.

Source

http://www.bioinf.jku.at/cnmops/cnmops.html.

References

Guenter Klambauer, Karin Schwarzbauer, Andreas Mayr, Djork-Arne Clevert, Andreas Mitterecker, Ulrich Bodenhofer, Sepp Hochreiter. cn.MOPS: mixture of Poissons for discovering copy number variations in next generation sequencing data with a low false discovery rate. Nucleic Acids Research 2012 40(9); doi:10.1093/nar/gks003.

gpovysil/cn.mops documentation built on Aug. 7, 2024, 12:45 p.m.