ref_cds: CDS from 2 reference transcripts entries of the same gene
In fursham-h/factR: Functional Annotation of Custom Transcriptomes
ref_cds R Documentation
CDS from 2 reference transcripts entries of the same gene
Description
A dataset containing coordinates of CDS from 2 reference transcripts of
mouse Ptbp1.
Usage
data(ref_cds)
Format
A GRangesList object with 2 elements:
- ranges
Chromosome, start, end, and strand info of 4 transcripts
and its exons
- type
Entry type; transcript or exon
- phase
Phase of open-reading frame
- gene_id
Matched gene_id
- gene_name
Name of gene
- transcript_id
ID given to transcripts
...
Source
fursham-h/factR documentation built on Aug. 20, 2023, 1:58 p.m.
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| ref_cds | R Documentation |
CDS from 2 reference transcripts entries of the same gene
Description
A dataset containing coordinates of CDS from 2 reference transcripts of mouse Ptbp1.
Usage
data(ref_cds)
Format
A GRangesList object with 2 elements:
- ranges
Chromosome, start, end, and strand info of 4 transcripts and its exons
- type
Entry type; transcript or exon
- phase
Phase of open-reading frame
- gene_id
Matched gene_id
- gene_name
Name of gene
- transcript_id
ID given to transcripts
...
Source
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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