EpivizGeneInfoData-class: 'EpivizGeneInfoData' objects
In epiviz/epivizr-release: R Interface to epiviz web app
Description
Details
Methods
Author(s)
Description
Encapsulate gene annotation
Details
This class extends EpivizTrackData-class. Like
its super-class, the data containing object is constrained to be of
class GIntervalTree. Ranges contained
in the object correspond to the genomic interval spanning all
annotated exons for the gene. Columns Gene and Exons are
assumed to be part of the elementMetadata of the data
containing object. Column Gene (character) is used as gene names in the
UI, column Exons (IRangesList) is used to annotate exon
start and ends.
Methods
-
plot(): Calls the genesChart method of EpivizDeviceMgr-class.
-
getMeasurements(): Returns a list describing data
encapsulated by this object.
Author(s)
Hector Corrada bravo
epiviz/epivizr-release documentation built on May 16, 2019, 8:18 a.m.
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Description Details Methods Author(s)
Description
Encapsulate gene annotation
Details
This class extends EpivizTrackData-class. Like
its super-class, the data containing object is constrained to be of
class GIntervalTree. Ranges contained
in the object correspond to the genomic interval spanning all
annotated exons for the gene. Columns Gene and Exons are
assumed to be part of the elementMetadata of the data
containing object. Column Gene (character) is used as gene names in the
UI, column Exons (IRangesList) is used to annotate exon
start and ends.
Methods
-
plot(): Calls thegenesChartmethod ofEpivizDeviceMgr-class. -
getMeasurements(): Returns a list describing data encapsulated by this object.
Author(s)
Hector Corrada bravo
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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