EpivizBpData-class: 'EpivizBpData' objects
In epiviz/epivizr-release: R Interface to epiviz web app
Description
Details
Methods
Author(s)
Description
Base-pair resolution quantitative data.
Details
This class extends EpivizTrackData-class directly. As such, its object field is constrained to contain a GIntervalTree object. Quantitative data for each genomic position is assumed to be stored in the elementMetadata slot of object.
Methods
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.checkColumns(columns): Checks argument columns is a subset of names(mcols(object)).
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.getColumns(): Returns names(mcols(object)).
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plot(): Calls the lineChart method of EpivizDeviceMgr-class with columns as argument.
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getMeasurements(): Returns a list describing data encapsulated by this object.
Author(s)
Hector Corrada Bravo
epiviz/epivizr-release documentation built on May 16, 2019, 8:18 a.m.
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Description Details Methods Author(s)
Description
Base-pair resolution quantitative data.
Details
This class extends EpivizTrackData-class directly. As such, its object field is constrained to contain a GIntervalTree object. Quantitative data for each genomic position is assumed to be stored in the elementMetadata slot of object.
Methods
-
.checkColumns(columns): Checks argumentcolumnsis a subset ofnames(mcols(object)). -
.getColumns(): Returnsnames(mcols(object)). -
plot(): Calls thelineChartmethod ofEpivizDeviceMgr-classwithcolumnsas argument. -
getMeasurements(): Returns a list describing data encapsulated by this object.
Author(s)
Hector Corrada Bravo
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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