plotStateExpression: Visualize feature expression distribution per state
In elldc/CellTrails: Reconstruction, visualization and analysis of branching trajectories
Description
Usage
Arguments
Details
Value
Author(s)
See Also
Examples
Description
Violin plots showing the expression distribution of a feature per state.
Usage
1
plotStateExpression(sce, feature_name)
Arguments
sce
A SingleCellExperiment object
feature_name
The name of the feature to be visualized
Details
Each data point displays the feature’s expression value in a
single sample. A violine plot shows the density (mirrored on the y-axis) of
the expression distribution per sample.
Value
A ggplot object
Author(s)
Daniel C. Ellwanger
See Also
Examples
1
2
3
4
# Example data
data(exSCE)
plotStateExpression(exSCE, feature_name="feature_1")
elldc/CellTrails documentation built on May 16, 2020, 4:40 a.m.
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
Description Usage Arguments Details Value Author(s) See Also Examples
Description
Violin plots showing the expression distribution of a feature per state.
Usage
1 | plotStateExpression(sce, feature_name)
|
Arguments
sce |
A |
feature_name |
The name of the feature to be visualized |
Details
Each data point displays the feature’s expression value in a single sample. A violine plot shows the density (mirrored on the y-axis) of the expression distribution per sample.
Value
A ggplot object
Author(s)
Daniel C. Ellwanger
See Also
Examples
1 2 3 4 | # Example data
data(exSCE)
plotStateExpression(exSCE, feature_name="feature_1")
|
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
Embedding an R snippet on your website
Add the following code to your website.
For more information on customizing the embed code, read Embedding Snippets.