add_sequences_to_hmmer_tbl: Add sequences from one of the output files from HMMER server...
In currocam/utilsHMMER: HMMERutils
View source: R/add_sequences_to_hmmer_tbl.R
add_sequences_to_hmmer_tbl R Documentation
Add sequences from one of the output files from HMMER
server to a Data Frame obtained by searching in HMMER.
Description
Add sequences from one of the output files from HMMER
server to a Data Frame obtained by searching in HMMER.
Usage
add_sequences_to_hmmer_tbl(data, extension = "fullfasta", max_times = 3)
Arguments
data
A Data Frame obtained with HMMERutils.
extension
A one-element character vector with
either "fullfasta" or "fasta".
max_times
An integer with the maximum number of
trials before throwing an error.
Value
A DataFrame with a new column named "hits.fullfasta" or
"hits.fasta" with the sequences.
currocam/utilsHMMER documentation built on Feb. 19, 2023, 9:54 p.m.
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View source: R/add_sequences_to_hmmer_tbl.R
| add_sequences_to_hmmer_tbl | R Documentation |
Add sequences from one of the output files from HMMER server to a Data Frame obtained by searching in HMMER.
Description
Add sequences from one of the output files from HMMER server to a Data Frame obtained by searching in HMMER.
Usage
add_sequences_to_hmmer_tbl(data, extension = "fullfasta", max_times = 3)
Arguments
data |
A Data Frame obtained with HMMERutils. |
extension |
A one-element character vector with either "fullfasta" or "fasta". |
max_times |
An integer with the maximum number of trials before throwing an error. |
Value
A DataFrame with a new column named "hits.fullfasta" or "hits.fasta" with the sequences.
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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