API for csbl-usp/PubScore
Automatic calculation of literature relevance of genes
| Global functions | |
|---|---|
| .getSimulation_test | Man page Source code |
| .query_pubmed | Man page |
| PubScore-class | Man page |
| all_counts | Man page |
| extract_attribute_to_coordinates | Source code |
| gene2pubmed_db | Man page |
| getScore | Man page |
| getScore,PubScore-method | Man page |
| get_all_counts | Man page |
| get_all_counts,PubScore-method | Man page |
| get_edges_from_network_edgelist | Source code |
| get_fruchterman_reingold_coordinates | Source code |
| get_literature_score | Man page Source code |
| get_sum_of_weights | Source code |
| heatmapViz | Man page |
| heatmapViz,PubScore-method | Man page |
| hgcn_entrez_reference | Man page |
| initialize,PubScore-method | Man page |
| networkViz | Man page |
| networkViz,PubScore-method | Man page |
| plot_literature_graph | Man page Source code |
| plot_literature_score | Man page Source code |
| pubscore | Man page Source code |
| set_all_counts<- | Man page |
| set_all_counts<-,PubScore-method | Man page |
| set_coordinate_types | Source code |
| set_genes_to_label | Source code |
| test_score | Man page |
| test_score,PubScore-method | Man page |
