gc_per_read: Calculate GC nucleotide sequence content per read of the...
In compbiocore/qckitfastq: FASTQ Quality Control
Description
Usage
Arguments
Value
Examples
Description
Calculate GC nucleotide sequence content per read of the FASTQ gzipped file
Usage
1
gc_per_read(infile)
Arguments
infile
A string giving the path for the fastqfile
Value
GC content perncentage per read
Examples
1
2
infile <- system.file("extdata", "10^5_reads_test.fq.gz", package = "qckitfastq")
gc_per_read(infile)[1:10]
compbiocore/qckitfastq documentation built on Sept. 20, 2019, 9:30 a.m.
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Description Usage Arguments Value Examples
Description
Calculate GC nucleotide sequence content per read of the FASTQ gzipped file
Usage
1 | gc_per_read(infile)
|
Arguments
infile |
A string giving the path for the fastqfile |
Value
GC content perncentage per read
Examples
1 2 | infile <- system.file("extdata", "10^5_reads_test.fq.gz", package = "qckitfastq")
gc_per_read(infile)[1:10]
|
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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