stoufferIntegrateDiggit: Use Stouffer's method to combine z-scores of DIGGIT...
In califano-lab/MOMA: Multi Omic Master Regulator Analysis
Description
Usage
Arguments
Value
Description
This function combines only positively associated DIGGIT scores by default to create a culmulative DIGGIT score for each cMR.
Usage
1
stoufferIntegrateDiggit(interactions, from.p = FALSE, pos.nes.only = TRUE)
Arguments
interactions
A list indexed by TF, includes z-scores or p-values for each interacting event
from.p
Integrate p-values or z-scores (default z-scores; from.p = FALSE)
pos.nes.only
Use only positive NES scores to rank proteins (default TRUE)
Value
A list indexed by TF, a stouffer integrated z-score
califano-lab/MOMA documentation built on June 7, 2020, 7:17 a.m.
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Description Usage Arguments Value
Description
This function combines only positively associated DIGGIT scores by default to create a culmulative DIGGIT score for each cMR.
Usage
1 | stoufferIntegrateDiggit(interactions, from.p = FALSE, pos.nes.only = TRUE)
|
Arguments
interactions |
A list indexed by TF, includes z-scores or p-values for each interacting event |
from.p |
Integrate p-values or z-scores (default z-scores; from.p = FALSE) |
pos.nes.only |
Use only positive NES scores to rank proteins (default TRUE) |
Value
A list indexed by TF, a stouffer integrated z-score
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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