GmtFromModules: GmtFromModules
In broadinstitute/PerturbationAMARETTO: Regulatory Network Inference and Driver Gene Evaluation using Integrative Multi-Omics Analysis and Penalized Regression
Description
Usage
Arguments
Value
View source: R/amaretto_htmlreport.R
Description
GmtFromModules
Usage
1
GmtFromModules(AMARETTOinit, AMARETTOresults, driverGSEA)
Arguments
AMARETTOinit
List output from AMARETTO_Initialize().
AMARETTOresults
List output from AMARETTO_Run().
driverGSEA
if TRUE , module driver genes will also be added to module target genes for GSEA.
Value
result
broadinstitute/PerturbationAMARETTO documentation built on Nov. 4, 2019, 8:14 a.m.
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Description Usage Arguments Value
View source: R/amaretto_htmlreport.R
Description
GmtFromModules
Usage
1 | GmtFromModules(AMARETTOinit, AMARETTOresults, driverGSEA)
|
Arguments
AMARETTOinit |
List output from AMARETTO_Initialize(). |
AMARETTOresults |
List output from AMARETTO_Run(). |
driverGSEA |
if TRUE , module driver genes will also be added to module target genes for GSEA. |
Value
result
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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