PNposPlot: Create an image showing the centres of intensity of the...

In ammar257ammar/ArrayAnalysis-Bioconductor: ArrayAnalysis

Create an image showing the centres of intensity of the positive and negative border elements

Description

This function (from functions_imagesQC.R) creates an image showing the centres of intensity of the positive and negative border elements for each array. It calls the borderQC2 function ( affyQCReport Bioconductor package).

Usage

PNposPlot(Data, WIDTH = 1000, HEIGHT = 1414, POINTSIZE = 24)

Arguments

Data	(Status: required) The raw data object (datatype: AffyBatch)
WIDTH	(Status: optional, Default:1000) png image width (datatype: number)
HEIGHT	(Status: optional, Default:1414) png image height (datatype: number)
POINTSIZE	(Status: optional, Default:24) png image point size (datatype: number)

Value

An image of centres of intensity of positive and negative border elements for each array, called "RawDataPosNegPositionPlot"

Examples

# PNposPlot(rawData)

ammar257ammar/ArrayAnalysis-Bioconductor documentation built on Jan. 29, 2024, 7:21 a.m.