modelDisplay: Display a model.

In ahonkela/tigre: Transcription factor Inference through Gaussian process Reconstruction of Expression

Description

displays the parameters of the model/kernel and the model/kernel type to the console.

Usage

  modelDisplay(model, ...)

Arguments

model	the model/kernel structure to be displayed.
...	(optional) indent level for the display.

See Also

modelExtractParam

Examples

  # Load a mmgmos preprocessed fragment of the Drosophila developmental
  # time series
  data(drosophila_gpsim_fragment)

  # The probe identifier for TF 'twi'
  twi <- "143396_at"
  # The probe identifier for the target gene
  targetProbe <- "152715_at"

  # Create the model, but do not optimise
  model <- GPLearn(drosophila_gpsim_fragment,
                   TF=twi, targets=targetProbe,
                   useGpdisim=TRUE, quiet=TRUE,
                   dontOptimise=TRUE)

  # Display the initial model
  modelDisplay(model)

ahonkela/tigre documentation built on Aug. 6, 2021, 12:08 p.m.