processSummarizationOutput: Prepare summarizaton output

In Vitek-Lab/SharedPeptidesExplorer: Weighted Protein-Level Summarization for Protein Clusters

Prepare summarizaton output

Description

Prepare summarizaton output

Usage

processSummarizationOutput(
  summary_per_cluster,
  feature_data,
  annotation,
  save_weights_history,
  save_convergence_history,
  tolerance
)

Arguments

summary_per_cluster	output of getClusterSummaries
feature_data	data.table in MSstatsTMT format. See also the Details section
annotation	output of getAnnotation
save_weights_history	logical, if TRUE, weights from all iterations will be returned
save_convergence_history	logical, if TRUE, all differences between consecutive weights estimator from all iterations will be returned
tolerance	tolerance to indicate weights convergence

Vitek-Lab/SharedPeptidesExplorer documentation built on April 14, 2025, 1:45 p.m.