getProteinsOptimProblem: Get optimization problem for protein-level summaries
In Vitek-Lab/SharedPeptidesExplorer: Weighted Protein-Level Summarization for Protein Clusters
getProteinsOptimProblem R Documentation
Get optimization problem for protein-level summaries
Description
Get optimization problem for protein-level summaries
Usage
getProteinsOptimProblem(design_matrix, y, norm, norm_parameter, proteins, psms)
Arguments
design_matrix
design matrix for protein model optimization
y
observed feature intensities
norm
"p_norm" or "Huber"
norm_parameter
p for norm=="p_norm", M for norm=="Huber"
proteins
vector of unique proteins
vector
of unique psms
Vitek-Lab/SharedPeptidesExplorer documentation built on April 14, 2025, 1:45 p.m.
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| getProteinsOptimProblem | R Documentation |
Get optimization problem for protein-level summaries
Description
Get optimization problem for protein-level summaries
Usage
getProteinsOptimProblem(design_matrix, y, norm, norm_parameter, proteins, psms)
Arguments
design_matrix |
design matrix for protein model optimization |
y |
observed feature intensities |
norm |
"p_norm" or "Huber" |
norm_parameter |
p for norm=="p_norm", M for norm=="Huber" |
proteins |
vector of unique proteins |
vector |
of unique psms |
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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