'Uniquorn' enables users to identify cancer cell lines. Cancer cell line misidentification and cross-contamination reprents a significant challenge for cancer researchers. The identification is vital and in the frame of this package based on the locations/ loci of somatic and germline mutations/ variations. The input format is vcf/ vcf.gz and the files have to contain a single cancer cell line sample (i.e. a single member/genotype/gt column in the vcf file).
Package details |
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Author | Raik Otto |
Bioconductor views | ExomeSeq ImmunoOncology StatisticalMethod WholeGenome |
Maintainer | 'Raik Otto' <raik.otto@hu-berlin.de> |
License | Artistic-2.0 |
Version | 2.17.3 |
Package repository | View on GitHub |
Installation |
Install the latest version of this package by entering the following in R:
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