mapCiceroToGenes: Map peaks to genes based on Cicero coaccessibility
In PFPrzytycki/CellWalkR: An R Package for Integrating and Visualizing Single-Cell and Bulk Data to Resolve Regulatory Elements
View source: R/DataParsingFunctions.R
mapCiceroToGenes R Documentation
Map peaks to genes based on Cicero coaccessibility
Description
mapCiceroToGenes Generates a mapping from genes to peaks per label
Usage
mapCiceroToGenes(labelGenes, cicero_gene_activities)
Arguments
labelGenes
data.frame with genes of interest in first column and corresponding
labels in second column
cicero_gene_activities
gene activity matrix
Value
list of genes and corresponding peaks by label
PFPrzytycki/CellWalkR documentation built on Oct. 26, 2023, 1:50 p.m.
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View source: R/DataParsingFunctions.R
| mapCiceroToGenes | R Documentation |
Map peaks to genes based on Cicero coaccessibility
Description
mapCiceroToGenes Generates a mapping from genes to peaks per label
Usage
mapCiceroToGenes(labelGenes, cicero_gene_activities)
Arguments
labelGenes |
data.frame with genes of interest in first column and corresponding labels in second column |
cicero_gene_activities |
gene activity matrix |
Value
list of genes and corresponding peaks by label
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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