report_dge: Report DGE
In NathanSkene/EWCE: Expression Weighted Celltype Enrichment
report_dge R Documentation
Report DGE
Description
Report differential gene expression (DGE) results
Usage
report_dge(exp, keep_genes, adj_pval_thresh = 0.05, verbose = TRUE)
Arguments
exp
Gene expression matrix.
keep_genes
Genes kept after DGE.
adj_pval_thresh
Minimum differential expression significance
that a gene must demonstrate across level2annot (i.e. cell types).
verbose
Print messages.
#' @inheritParams orthogene::convert_orthologs
Value
Null output.
NathanSkene/EWCE documentation built on Nov. 3, 2024, 8:16 a.m.
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| report_dge | R Documentation |
Report DGE
Description
Report differential gene expression (DGE) results
Usage
report_dge(exp, keep_genes, adj_pval_thresh = 0.05, verbose = TRUE)
Arguments
exp |
Gene expression matrix. |
keep_genes |
Genes kept after DGE. |
adj_pval_thresh |
Minimum differential expression significance
that a gene must demonstrate across |
verbose |
Print messages. #' @inheritParams orthogene::convert_orthologs |
Value
Null output.
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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